Been searching for something like this for months. Our Shopify store processes 500+ orders monthly and this handles everything perfectly. Date formats, tax columns, refunds - all correct.
Reconcile Stripe in QuickBooks Online — Complete Fee Matching
Reconcile your Stripe account in QuickBooks Online. Match Net amounts to bank, track fees as expenses, and close your books accurately.
How It Works
Export from Stripe
Stripe Dashboard → Balance → Export all transactions as CSV
Convert to Journal Entries
Upload here, configure your QuickBooks account names
Import to QuickBooks
Settings → Import Data → Journal Entries → Upload converted file
Reconcile in QuickBooks
Go to Banking → Reconcile. Net amounts match bank deposits.
Why Stripe Reconciliation Is Challenging
The Gross vs Net Problem
How This Tool Helps
Your Data is Safe
Bank-Level Security
256-bit SSL encryption. Same standards as major financial institutions.
No Data Storage
Files are processed directly in browser. No calls to our servers.
GDPR Compliant
Full EU data protection compliance. Your privacy rights protected.
Field Mapping
How Stripe Balance_Transactions fields map to Quickbooks Online Journal Entry
| Stripe Balance_Transactions | Source Value | Quickbooks Online Journal Entry | Target Value | Note | |
|---|---|---|---|---|---|
Created (UTC) |
2025-01-15 14:00:00 |
→ | JournalDate |
01/15 14:00:00/2025
|
Transaction date to MM/DD/YYYY |
Amount |
100.00 |
→ | Credits |
100.00
|
Gross sales credited to revenue |
Fee |
3.20 |
→ | Debits |
3.20
|
Processing fees debited to expense |
Automatic Payout ID |
po_1A2B3Cd123xyz |
→ | Memo |
po_1A2B3Cd123xyz
|
Payout reference in memo |
Why Use This Tool?
Complete Fee Tracking
Every Stripe processing fee recorded as a separate expense line item.
1099-K Ready
Gross amounts match your Stripe 1099-K. No year-end surprises.
Bank Reconciliation Ready
Net amounts match your bank feed exactly. Reconcile in minutes.
Refund & Dispute Handling
Refunds reduce revenue, disputes tracked as losses with fees.
Month-End Close
Stripe balance in QBO matches Stripe Dashboard when reconciled.
Payout Aggregation
Transactions grouped by payout for easy bank matching.
Data Transformation
Each Stripe payout becomes a balanced journal entry with 3 lines
One row per transaction in a payout batch
Created (UTC),
Amount,
Fee,
Net,
Automatic Payout ID
Double-entry accounting with balanced debits and credits
Common Journal Entry Import Errors
Issues you might encounter when importing Balance Transactions Export data to Journal Entry - and how we solve them
Unbalanced Journal Entry
QuickBooks requires Debits = Credits for each journal entry
Debit: $970, Credit: $1000 (unbalanced)
Debit: $970 + $30, Credit: $1000 (balanced)
We auto-calculate balanced entries: Bank + Fees = Sales
Each payout creates a balanced entry with fee breakdown
Account Names Not Found
QuickBooks import fails if account names don't match your Chart of Accounts
Account: 'Stripe Sales' (not in your QB)
Account: 'Sales Income' (matches your QB)
Configure your actual account names before converting
Use the account settings to match your QuickBooks Chart of Accounts
Duplicate Journal Number
Importing the same payout twice creates duplicate entries
Payout po_123 imported twice
Each payout ID is unique
Journal numbers include payout ID to prevent duplicates
Check your date range to avoid re-importing processed payouts
Frequently Asked Questions
Stripe → Quickbooks Online Data Ecosystem
All available data flows from Stripe to Quickbooks Online
Created (UTC) → JournalDate
Amount → Credits
Fee → Debits
Name → Name
Email → Email
Phone → Phone
Number → InvoiceNo
Created → InvoiceDate
Due Date → DueDate
id → RefNumber
Created (UTC) → TxnDate
Amount → ItemAmount
Arrival Date → JournalDate
Amount → Debits
id → Memo