Reconcile Amazon Seller in QuickBooks — Complete Settlement Matching

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Reconcile Complete

QuickBooks Journal Entries Format
valid rows

Reconcile your Amazon Seller settlements in QuickBooks Online. Decode settlement reports, track FBA fees, and match bank deposits accurately.

No API required
Browser-based processing
Run on Google Cloud Platform

Download Sample

Sample Amazon Settlement Report V2

Download

Tool Rating

4.7 / 5 (324 votes)

How It Works

1

Download Settlement

Seller Central → Reports → Payments → Settlement Reports → Download V2

2

Convert to Journal Entries

Upload here, configure your QuickBooks account names

3

Import to QuickBooks

Settings → Import Data → Journal Entries → Upload converted file

4

Reconcile

Match journal entry net amounts to bank deposits

Why Amazon Reconciliation Is Challenging

The Settlement Report Nightmare

Amazon deposits a single lump sum representing hundreds of transactions. Your bank shows $5,000 deposited, but understanding what that includes is nearly impossible. The Settlement Report has 30+ fee types: referral fees, FBA pick/pack, weight handling, storage, advertising, refunds, reimbursements, and more.

How This Tool Helps

We decode Amazon Settlement Reports into proper Journal Entries: - Gross sales credited to Revenue - FBA fees, referral fees, and other fees debited to respective expense accounts - Refunds reduce revenue - Net settlement matches your bank deposit Each entry balances (Debits = Credits), and you get complete visibility into Amazon's fee structure in your P&L.

Your Data is Safe

Bank-Level Security

256-bit SSL encryption. Same standards as major financial institutions.

No Data Storage

Files are processed directly in browser. No calls to our servers.

GDPR Compliant

Full EU data protection compliance. Your privacy rights protected.

ISO/IEC 27001 Certified GDPR Compliant Swiss Privacy CCPA Compliant

Field Mapping

How Amazon_Seller Settlements fields map to Quickbooks Online Journal Entry

Amazon_Seller Settlements Source Value Quickbooks Online Journal Entry Target Value Note
settlement-id 16427587891 JournalNo 16427587891 Settlement ID as journal reference
deposit-date 2025-01-17T00:00:00+00:00 JournalDate 01/17/2025 Payout date (MM/DD/YYYY)
amount-description Commission Account Name Commission Fee type maps to Chart of Accounts
amount -15.00 Debits/Credits Positive=Credit, Negative=Debit (inverted)
total-amount 6500.00 Net Payout Balancing entry to Clearing Account

Why Use This Tool?

Settlement Decoding

Amazon's V2 flat file decoded into clear journal entries.

Fee Categorization

FBA, referral, storage, advertising fees tracked in separate accounts.

1099-K Ready

Gross sales recorded to match Amazon's 1099-K reporting.

Refund Handling

Refunds reduce revenue with proper accounting entries.

Multi-Marketplace

Handle US, UK, EU, CA, and other marketplaces.

Order Tracking

Order IDs and SKUs in memos for audit trail.

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Data Transformation

Multiple settlement line items aggregate into one balanced Journal Entry

Input Amazon Settlement Lines

One row per transaction type/fee in the settlement period

Key columns: settlement-id, amount-type, amount-description, amount
N:1 — Multiple input rows aggregate to one output row
Output Journal Entry aggregated rows per input

One balanced double-entry journal per settlement

Sales Revenue CREDIT income account for gross sales
Amazon Fees DEBIT expense accounts for each fee category
Net Payout DEBIT Amazon Clearing Account (matches bank deposit)
Sum(Debits) must equal Sum(Credits) for QuickBooks import

Common Journal Entry Import Errors

Issues you might encounter when importing Settlement Report V2 data to Journal Entry - and how we solve them

Journal Entry Out of Balance

QuickBooks rejects entries where Debits ≠ Credits

Debits: $5000.00, Credits: $4999.99
Debits: $5000.00, Credits: $5000.00

We automatically add a Reconciliation Discrepancy line for rounding

Re-upload your file - balancing is handled automatically

Unrecognized Amazon Fee Type

Amazon introduces new fee types (e.g., 2025 Inbound Placement Fee)

InboundPlacementServiceFee
Mapped to Amazon Inbound Fees

Our fee taxonomy includes 100+ Amazon fee types including 2025 updates

Unknown fees are mapped to 'Amazon Other Fees' with a warning

Invalid Date Format

QuickBooks requires MM/DD/YYYY dates

2025-01-15T00:00:00+00:00
01/15/2025

ISO 8601 timestamps are automatically converted

Dates are converted automatically during processing

Negative Amount Handling

Amazon uses negative for fees; QuickBooks needs explicit Debit/Credit

Amount: -25.50 (Commission)
Debit: 25.50 to Amazon Selling Fees

Negative amounts become Debits; positive amounts become Credits

Sign handling is automatic - no manual adjustment needed

Frequently Asked Questions

Use the Settlement Report V2 (Flat File). It contains the most detail and is required for proper fee categorization. Available in Reports → Payments → Settlement Reports.
This tool provides similar fee categorization to A2X but as a one-time conversion rather than subscription. You get journal entries with proper debits/credits for each settlement.
Reimbursements for lost/damaged inventory are recorded as 'Other Income' to keep them separate from sales revenue. This ensures accurate sales reporting.
Process each marketplace settlement separately. If they deposit to different bank accounts, set the correct bank account for each conversion.
Yes. We record gross sales before fees. The total Credits to your sales account for the year should match Amazon's 1099-K gross amount.
Yes! Amazon uses tab-separated format by default. We detect and handle both TSV (.txt) and CSV formats automatically.