Been searching for something like this for months. Our Shopify store processes 500+ orders monthly and this handles everything perfectly. Date formats, tax columns, refunds - all correct.
Afterpay QuickBooks Reconciliation Tool
Reconcile Afterpay BNPL settlements with QuickBooks Online bank accounts. Match net payouts to deposits.
How It Works
Export
Afterpay → Reconciliation
Format
Convert
Import
QuickBooks → Upload
Reconcile
Match deposits
Reconciling Afterpay in QuickBooks
BNPL Reconciliation
Reconciliation Format
Your Data is Safe
Bank-Level Security
256-bit SSL encryption. Same standards as major financial institutions.
No Data Storage
Files are processed directly in browser. No calls to our servers.
GDPR Compliant
Full EU data protection compliance. Your privacy rights protected.
Field Mapping
How Afterpay Settlements fields map to Quickbooks Online Bank Transaction
| Afterpay Settlements | Source Value | Quickbooks Online Bank Transaction | Target Value | Note | |
|---|---|---|---|---|---|
Settlement Date |
17/01/2025 |
→ | Date |
17/01/2025
|
Convert to MM/DD/YYYY |
Net Settlement Amount |
145.60 |
→ | Amount |
|
Net after Afterpay fees |
Merchant Reference |
ORD-2025-001 |
→ | Memo |
|
Order reference |
Order ID |
AP-12345678 |
→ | Name |
|
Afterpay order identifier |
Why Use This Tool?
Net Matching
Matches deposits
Date Alignment
Settlement dates
Quick
60 seconds
No API Setup
Works with standard CSV exports. No technical setup required.
60-Second Processing
Upload, convert, download in under a minute.
No Monthly Fees
Pay per use only. No subscriptions or recurring charges.
Data Transformation
Each Afterpay settlement becomes one QBO bank transaction row
One row per order settlement with net amount after fees
Order ID,
Settlement Date,
Net Settlement Amount,
Merchant Fee incl Tax
Single bank transaction line for each settlement
Common Bank Transaction CSV (4-Column) Import Errors
Issues you might encounter when importing Reconciliation Report Export data to Bank Transaction CSV (4-Column) - and how we solve them
QuickBooks Rejects Wrong Column Count
QBO expects 3-column format but got 4-column (or vice versa)
Toggle 'use_3col_format' option. QBO bank feeds sometimes require 3-column (Date, Amount, Memo), sometimes 4-column (Date, Amount, Name, Memo).
QuickBooks Doesn't Recognize Dates
QBO requires MM/DD/YYYY format for dates
Processor uses MM/DD/YYYY by default. Ensure Afterpay export has valid dates. Check for European date formats (DD/MM/YYYY) which won't import.
Negative Settlement Amounts
Net settlement shows negative values due to high refund activity or fee adjustments
This is normal for refund-heavy periods. Negative amounts appear as withdrawals in QBO. Review fee structure if consistently negative.
Frequently Asked Questions
Afterpay → Quickbooks Online Data Ecosystem
All available data flows from Afterpay to Quickbooks Online