About 40% of our checkout goes through Afterpay and the reconciliation reports never matched what QuickBooks expected. I converted 6 weeks of BNPL settlements in one upload and the net amounts lined up exactly with our bank deposits.
Afterpay QuickBooks Integration
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Invoice import blocked if Sales Tax enabled in QBO
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QuickBooks Online Bank Upload CSV Format
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Seamless Afterpay BNPL and QuickBooks Online integration using CSV. No monthly subscription, no complex setup.
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How Integration Works
1
Export from Afterpay
Business Hub → Settlements → Reconciliation Report → Download CSV
2
Upload and Configure
Upload Reconciliation Report Export CSV and choose Bank Transaction CSV (4-Column) format
3
Preview and Download
Review converted data, download Quickbooks Online-ready file
4
Import to QuickBooks Online
Banking → Select Account → Upload from Computer → Import CSV
Your file is ready for QuickBooks Online Bank Upload CSV — just upload it, no extra steps needed.
How People Use This
Three of my clients offer Afterpay and none of them could get the CSV into QuickBooks Online without manual reformatting. The 4-column format conversion handles the fee-adjusted payouts correctly so the Credit/Debit columns are ready for import.
I was manually entering Afterpay settlements into QuickBooks every week because the CSV columns did not match. Converted my entire Q3 backlog in about 2 minutes. The date reformatting to MM/DD/YYYY alone saved me hours of cleanup.
Integration Questions Answered
Do I need third-party software to sync Afterpay?
QuickBooks doesn't natively integrate with Afterpay, so you'll need a third-party tool like Synder or a manual CSV import to get your settlements into QuickBooks.
How long does Afterpay reconciliation take?
With automated integration tools, Afterpay settlements sync to QuickBooks in 2 clicks. Manual CSV imports depend on your batch size but typically complete within minutes.
What CSV columns does Afterpay data include?
Afterpay CSV exports typically include transaction date, description, and amount. Ensure your date format matches MM/DD/YYYY for QuickBooks compatibility.
Afterpay QuickBooks Integration Made Simple
The BNPL Import Challenge
Afterpay's reconciliation reports include Order Amount, Merchant Fees, Fee Tax,
and Net Settlement in separate columns. QuickBooks Online bank uploads require
exactly 3 or 4 columns with specific formatting.
Direct import fails due to column count and format mismatches. Whether you want to connect Afterpay to QuickBooks or import Afterpay settlement data, the CSV needs reformatting first.
Simple CSV Integration
Our CSV-based approach: Export Afterpay reconciliation reports, convert to QuickBooks
bank format, import net settlement amounts. Track fees separately if needed.
Seamless and Secure Integration
Automatic Column Matching
Fields from your source file are mapped to the right columns in the target format. No manual work needed.
Runs in Your Browser
Integration runs entirely in your browser. No third-party access to your data.
GDPR Compliant
No data leaves your machine. Full EU privacy compliance.
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Yes! Full refund within 14 days if no credits used. Partial refund for unused credits anytime. Contact sup@spreadsheetbroccoli.com.
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Field Mapping
How Afterpay Settlements fields map to Quickbooks Online Bank Transaction
| Afterpay Settlements | Source Value | Quickbooks Online Bank Transaction | Target Value | Note | |
|---|---|---|---|---|---|
Settlement Date |
17/01/2025 |
→ | Date |
17/01/2025
|
Convert to MM/DD/YYYY |
Net Settlement Amount |
145.60 |
→ | Amount |
|
Net after Afterpay fees |
Merchant Reference |
ORD-2025-001 |
→ | Memo |
|
Order reference |
Order ID |
AP-12345678 |
→ | Name |
|
Afterpay order identifier |
Why Automate the Data Transfer?
BNPL-Optimized Conversion
Handles Afterpay's unique settlement structure with fees and net amounts.
No API Integration
Works with Business Hub CSV exports. No developer setup needed.
Fee-Adjusted Amounts
Imports net settlement amounts that match your bank deposits.
Instant Processing
Upload → Download in seconds.
Format Options
Choose 3-column or 4-column QuickBooks format based on preference.
Local Processing
Files process in browser. No data leaves your computer.
Data Transformation
Each Afterpay settlement becomes one QBO bank transaction row
Input
Afterpay Settlement
One row per order settlement with net amount after fees
Key columns:
Order ID,
Settlement Date,
Net Settlement Amount,
Merchant Fee incl Tax
1:1 — One input row creates one output row
Output
QBO Bank Transaction
1 rows per
input
Single bank transaction line for each settlement
Settlement Transaction
Net amount deposited to bank (after Afterpay fees deducted)
Net Settlement Amount = Order Amount - Merchant Fee incl Tax
Common Bank Transaction CSV (4-Column) Import Errors
Issues you might encounter when importing Reconciliation Report Export data to Bank Transaction CSV (4-Column) - and how we solve them
QuickBooks Rejects Wrong Column Count
QBO expects 3-column format but got 4-column (or vice versa)
Toggle 'use_3col_format' option. QBO bank feeds sometimes require 3-column (Date, Amount, Memo), sometimes 4-column (Date, Amount, Name, Memo).
QuickBooks Doesn't Recognize Dates
QBO requires MM/DD/YYYY format for dates
Processor uses MM/DD/YYYY by default. Ensure Afterpay export has valid dates. Check for European date formats (DD/MM/YYYY) which won't import.
Negative Settlement Amounts
Net settlement shows negative values due to high refund activity or fee adjustments
This is normal for refund-heavy periods. Negative amounts appear as withdrawals in QBO. Review fee structure if consistently negative.
Frequently Asked Questions
Your data never leaves your device. All files are processed entirely in your browser using client-side JavaScript - no data is stored on our servers or sent anywhere. There's no account to hack, no database storing your files, and no API connections to your bank or accounting software. You upload, convert, download, and we forget it immediately.
No payment or signup required. You can upload your file, see a free preview of the conversion results, and verify everything looks correct before paying anything. If it doesn't work for your files, you haven't wasted any money. We only charge when you're satisfied and ready to download the final converted file.
You can, but free scripts and AI often miss edge cases that break real-world data: missing SKUs, currency formatting quirks, tax calculation errors, or date format mismatches. We have battle-tested validators specifically designed for accounting software imports that catch these issues before they corrupt your books. Plus, you get instant browser-based conversion without installing Python or managing dependencies.
4-column (Credit/Debit split) is recommended for clarity. 3-column uses signed amounts (positive/negative).
This tool imports net amounts. To show fees, create journal entries splitting gross sales, fees, and net settlement.
Refunds are detected by Type column and converted to Debit entries automatically.
Recommended: Create 'Afterpay Clearing' account in QuickBooks for imports, then match against bank deposits.
QuickBooks doesn't natively integrate with Afterpay, so you'll need a third-party tool like Synder or a manual CSV import to get your settlements into QuickBooks.
With automated integration tools, Afterpay settlements sync to QuickBooks in 2 clicks. Manual CSV imports depend on your batch size but typically complete within minutes.
Afterpay data doesn't include payout and fee information, so you'll need to add those manually or use QuickBooks automation rules to handle merchant fees separately.
Afterpay CSV exports typically include transaction date, description, and amount. Ensure your date format matches MM/DD/YYYY for QuickBooks compatibility.
Use QuickBooks' automatic matching feature after import, or match transactions manually in the Banking tab if amounts differ or customer info is missing.
QuickBooks accepts up to 1,000 transactions per CSV upload. Split larger batches into multiple files and upload separately.
Export your reconciliation report from the Afterpay Business Hub, upload to our converter, then import the resulting CSV to QuickBooks Online. No API or app needed.
Afterpay → Quickbooks Online Data Ecosystem
All available data flows from Afterpay to Quickbooks Online
Also available as
This platform pair is available in 1 other hub
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